The visualization pipeline is only run for datasets with at least 3 samples.
More information about the individual tools that make up the pipelines can be found in the bioBakery repository.
StrainPhlAn: Should strain profiling with StrainPhlAn be run? Strain profiling can greatly increase the runtime of your job depending on the size and diversity of your samples. (Logical. Default: False). Note: at least 4 samples must be provided in order to run StrainPhlAn.
Project name: A project name to go at the top of the html graphical output.